Date

Attendees

Goals

Discussion items

TimeItemWhoNotes
 move tcap websiteClayhosted at Cornell
now connections from http are redirected to https
 move reports to new menuClay

GWAS Results
Marker Annotations by Experiment (updated page)
Marker Synonyms by Experiment
JBrowse

  Clayredesign Download, Marker Annotation
  Jean-Luctool request from Jorge
   calculating markers for selecting lines (too slow?)
   PolyMarker
see demo: https://tcap.pw.usda.gov/wheat/genotyping/polymarker_tool.php
   Variant Effect Predictor
see demo: https://tcap.pw.usda.gov/wheat/genotyping/vep_tool.php

Action items

  • Clayton L Birkett data template for Oat is wrong. could include all species on each site or make dynamic
  • Clayton L Birkett test POOL code on new website
  • Clayton L Birkett are cookies to check data use requirement working?
  • Clayton L Birkett what is size of 2D table? about 180K
  • Clayton L Birkett performance problem in download - if map selected then show markers count in side menu, warn users that only markers in map will be given
  • Clayton L Birkett cascade selection of maps in select markers page
  • Clayton L Birkettin Jorge's tool display results if less than 1000 markers otherwise provide download button