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Created by
Clayton L Birkett on Jan 26, 2016
1 minute read
Date
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Goals
Discussion items
| Time | Item | Who | Notes |
|---|---|---|---|
| 10min | additinal key in genotyping experiments | Jean-Luc | We usually think that people will not try to genotype the same line in the same genotyping experiment, so having those two indices will keep everything that needs to be separate separate. But in the oat genotyping project, we have come across the problem that sometimes the same line (maybe variety name versus experimental line name) was in the same genotyping trial twice. In cassava, the result of a genotyping experiment is associated with two keys "LineName:LibraryPrep". I think the LibraryPrep is unique within the Genomic Diversity Facility. So I wonder if we should try to implement that in T3, to have a T3-wide unique "genotyping assay" as an index within genotyping experiments, so that people could submit the same line however many times they wanted within the same experiment. |