Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Goals

Discussion items

TimeItemWhoNotes
 move tcap websiteClayhosted at Cornell
now connections from http are redirected to https
 move reports to new menuClay
moved

GWAS Results

,


Marker Annotations

,

by Experiment (updated page)
Marker Synonyms

, JBrowse
redesign Report, Marker Annotations

by Experiment
JBrowse

  
 
Clayredesign Download, Marker Annotation
  Jean-Luctool request from Jorge
: breeding simulation Qu-Gene?
   calculating markers for selecting lines (too slow?)
   PolyMarker
see demo: https://tcap.pw.usda.gov/wheat/genotyping/polymarker_tool.php
   Variant Effect Predictor
see demo: https://tcap.pw.usda.gov/wheat/genotyping/vep_tool.php

Action items

  •  Clayton L Birkett data template for Oat is wrong. could include all species on each site or make dynamic
  •  Clayton L Birkett test POOL code on new website
  •  Clayton L Birkett are cookies to check data use requirement working?
  •  Clayton L Birkett what is size of 2D table? about 180K
  •  Clayton L Birkett performance problem in download - if map selected then show markers count in side menu, warn users that only markers in map will be given
  •  Clayton L Birkett cascade selection of maps in select markers page
  •  Clayton L Birkettin Jorge's tool display results if less than 1000 markers otherwise provide download button