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Date

23 Aug 2017

Attendees

Clayton L Birkett
Gina Brown-Guedira, Eddie Lauer

Goals

Set goals, objectives or some context for this meeting.

Discussion items

Time	Item	Who	Notes
	2017_WheatCAP		some of the parents are Ae. tauschii accessions Eduard will generate VEP and SIFT score verify filtering of "NA"
	Variant Effect Predictor/SIFT	Clay	does Ensembl provide needed information? add track with T3 markers to Ensembl or create our own JBrowse
	Select markers by variants	Clay	in development?
	Visualization (JBrowse)		do we need a track for each germplasm? SIFT, VEP
	BLAST		links to genome viewer (BLAST tool, or precomputed table of links)

Action items

Clayton L Birkett select by variant should accept 2 or more lines
Clayton L Birkett add gene annotation to 2017_WheatCAP
Clayton L Birkett instruction for TASSEL to open 2017_WheatCAP
Clayton L Birkett filter on feature type (ORF, exon, etc.) for VEP
Clayton L Birkett add missing column to download page for variations.php
Clayton L Birkett need 200bp on either side for primer design
Clayton L Birkett make single track with variants for 2017_WheatCAP
Clayton L Birkett on variations page add link to markers