Increase computational capacity for Crane's group.


Brian Crane

Karen

Lulu

Overall strategy

Upgrade cluster's OS and add 2 new compute notes. Very similar retro-fit as we did with Collum's system this summer

Broad steps

Top Level Task Description

Effort Est.

Assignee

Keep cluster running until cut-over noted below.

 

 

Pull an existing, old compute node from Lancaster's cluster and convert it into a new head node.

 

 

Install new OS

 

 

Add a new compute node (from Crane) to this new head node.

 

 

Pull another existing, old compute node from Lancaster's cluster and test it mounts to new head node.

 

 

Test new head node with 2 new compute nodes (from Crane), and old compute node

 

 

Cut-over accounts and data from old compute node to new compute node.

 

 

Move the rest of Lancaster's old compute nodes to the new head node.

 

 

Confirm all is working.

 

 

Convert old head node into a compute node.

 

 


Current and recent activity and decisions

8/27/13Tue: Oliver met with Brian Crane

Previously shared activity and ideas

From ~3/13:

1) CRCF to advise on what system would work. Do within 2 weeks of 3/4/13. RedBarn and Dell. Informed by applications used. ~$5K.

2) CRCF to explore possible opportunities for mutual benefit, including:

Applications and other software required

Rosetta (Compiler: gcc, g++, Scons)

Gaussian

ORCA - DFT Free

Sbgrid

Charm-based s/w

FireFly - QM/MM Free

ADF

NAMD - MD Free

QSIH

TINKER

MOLCAS

GRUMACS

Notes

8/27/13Tue: Oliver met with Brian Crane (notes, above).

End of July 2013: Oliver met with Crane, reviewing likely options and time. Agreed on next check-in in ~ 1 month.

3/4/13: First meeting, Crane and Oliver. Characterize needs, explore some alternatives, and define next steps.


Options considered