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- Sample submissions are required to be in a plate format with 95 samples and 1 random blank.
- We ask for concentration, but we re-quantify and it would be great to be able to enter those new numbers into the database.
- I would love a system which would notify sender when I check in the DNA so I don't have to manually send them an email.
General Workflow notes
- sufficient dashboard pages to see what is in queue and at what step
- when a task is completed, update status flag for data object (sample, project, etc)
Integration with
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Submitting DNA Sequencing requests to service providers
- Currently I have to enter sample information onto the Core Facility website by hand. Automation of this would be complicated by my need to assign billing to different accounts. In addition, after Tom has made the flowcell I go onto Wikilims to get the flowcell name and lane assignments for the samples I submitted.
- If it is a 384-plex I make a new name for the sample submitted that is not recorded anywhere (could be written in redmine, but I don't always remember). The database lane_id is also appended to the name so there is a numerical way to check back, but people like a human readable name that correlates to the project.
- If samples are going to be sequenced off site then, in addition to the above steps I need to create additional emails and packing slips.
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