*** This version of Confluence is for testing only and contains a copy of content from June 29th 2026. No changes will be preserved. ***
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- Flowcell_QC_stats.txt- I don't usually use, it blasts reads against some ApeKI Maize and looks at read length, but only works for Maize / ApeKI
- Flowcell_QC1.txt- I use this summary table, but would like to change it a lot.
- Flowcell_QC2.txt- This has the reads per sample, very useful.
- Flowcell_adapter_dimers.txt- not too useful for me because too big of a file
- Flowcell_adapter_dimers_parsed.txt- Lists number of dimers per barcode. I like it!
Questions:
- Does it keep junk reads somewhere?
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Changes to Flowcell_QC1.txt file:
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